Index

A

abnormal_probability() (in module meganorm.utils.nm) abs_canonical_power() (in module meganorm.src.featureExtraction) abs_individual_power() (in module meganorm.src.featureExtraction) add_feature() (in module meganorm.src.featureExtraction) add_specific_layout() (in module meganorm.layouts.layouts)

aggregate_metrics_across_runs() (in module meganorm.utils.nm) auto_ica() (in module meganorm.src.preprocess) auto_ica_with_mean() (in module meganorm.src.preprocess) auto_parallel_feature_extraction() (in module meganorm.utils.parallel) AutoIca_with_IcaLabel() (in module meganorm.src.preprocess)

C

cal_stats_for_INOCs() (in module meganorm.utils.nm) calculate_PNOCs() (in module meganorm.utils.nm) check_jobs_status() (in module meganorm.utils.parallel) check_log_for_success() (in module meganorm.utils.freesurfer) check_user_jobs() (in module meganorm.utils.parallel)

collect_results() (in module meganorm.utils.parallel) computePsd() (in module meganorm.src.psdParameterize) create_feature_container() (in module meganorm.src.featureExtraction) create_layouts() (in module meganorm.layouts.layouts) create_slurm_script() (in module meganorm.utils.freesurfer)

D

drop_noisy_meg_channels() (in module meganorm.src.preprocess)

E

estimate_centiles() (in module meganorm.utils.nm)

evaluate_mace() (in module meganorm.utils.nm) exponent() (in module meganorm.src.featureExtraction)

F

factorize_columns() (in module meganorm.utils.IO) feature_extract() (in module meganorm.src.featureExtraction)

find_ica_component() (in module meganorm.src.preprocess) find_peak_in_band() (in module meganorm.src.featureExtraction) freesurfer_QC() (in module meganorm.utils.freesurfer)

G

get_relative_path() (in module meganorm.layouts.layouts)

H

hbr_data_split() (in module meganorm.utils.nm)

I

isolate_periodic() (in module meganorm.src.featureExtraction)

L

list_subject_ids() (in module meganorm.utils.freesurfer)

load_specific_layout() (in module meganorm.layouts.layouts)

M

main() (in module meganorm.src.mainParallel) make_config() (in module meganorm.utils.IO) make_demo_file_bids() (in module meganorm.utils.IO) meganorm module meganorm.layouts module meganorm.layouts.layouts module meganorm.src module meganorm.src.featureExtraction module meganorm.src.mainParallel module meganorm.src.preprocess module meganorm.src.psdParameterize module meganorm.utils module meganorm.utils.EEGlab module meganorm.utils.freesurfer module

meganorm.utils.IO module meganorm.utils.nm module meganorm.utils.parallel module merge_datasets_with_glob() (in module meganorm.utils.IO) merge_fidp_demo() (in module meganorm.utils.IO) module meganorm meganorm.layouts meganorm.layouts.layouts meganorm.src meganorm.src.featureExtraction meganorm.src.mainParallel meganorm.src.preprocess meganorm.src.psdParameterize meganorm.utils meganorm.utils.EEGlab meganorm.utils.freesurfer meganorm.utils.IO meganorm.utils.nm meganorm.utils.parallel

N

normalize_column() (in module meganorm.utils.IO)

O

offset() (in module meganorm.src.featureExtraction)

P

parameterizePsd() (in module meganorm.src.psdParameterize) peak_center() (in module meganorm.src.featureExtraction) peak_power() (in module meganorm.src.featureExtraction) peak_width() (in module meganorm.src.featureExtraction) prepare_eeg_data() (in module meganorm.src.preprocess)

prepare_mri_data() (in module meganorm.utils.freesurfer) prepare_prediction_data() (in module meganorm.utils.nm) preprocess() (in module meganorm.src.preprocess) progress_bar() (in module meganorm.utils.parallel) psd_ratio() (in module meganorm.src.featureExtraction) psdParameterize() (in module meganorm.src.psdParameterize)

R

RawEEGLAB (class in meganorm.utils.EEGlab) read_raw_eeglab() (in module meganorm.utils.EEGlab) rel_canonical_power() (in module meganorm.src.featureExtraction)

rel_individual_power() (in module meganorm.src.featureExtraction) rerun_failed_subs() (in module meganorm.utils.freesurfer) run_parallel_reconall() (in module meganorm.utils.freesurfer)

S

save_sensor_layouts() (in module meganorm.layouts.layouts) sbatchfile() (in module meganorm.utils.parallel) segment_epoch() (in module meganorm.src.preprocess) separate_eyes_open_close_eeglab() (in module meganorm.utils.IO)

separate_patient_data() (in module meganorm.utils.IO) shapiro_stat() (in module meganorm.utils.nm) storeFooofModels() (in module meganorm.utils.IO) submit_jobs() (in module meganorm.utils.parallel) summarizeFeatures() (in module meganorm.src.featureExtraction)

W

wilcoxon_rank_test() (in module meganorm.utils.nm)